Add 'nixpkgs/' from commit '2436c27541b2f52deea3a4c1691216a02152e729'

git-subtree-dir: nixpkgs
git-subtree-mainline: 1148b1d122bc03e9a3665856c9b7bb96bd4e3994
git-subtree-split: 2436c27541b2f52deea3a4c1691216a02152e729

1 files changed, 38 insertions, 0 deletions

diff --git a/nixpkgs/pkgs/development/python-modules/dendropy/default.nix b/nixpkgs/pkgs/development/python-modules/dendropy/default.nix
new file mode 100644
index 00000000000..c0055580c40
--- /dev/null
+++ b/nixpkgs/pkgs/development/python-modules/dendropy/default.nix
@@ -0,0 +1,38 @@
+{ lib
+, pkgs
+, buildPythonPackage
+, fetchFromGitHub
+, pytest
+}:
+
+buildPythonPackage rec {
+  pname   = "DendroPy";
+  version = "4.4.0";
+
+  # tests are incorrectly packaged in pypi version
+  src = fetchFromGitHub {
+    owner = "jeetsukumaran";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "097hfyv2kaf4x92i4rjx0paw2cncxap48qivv8zxng4z7nhid0x9";
+  };
+
+  preCheck = ''
+    # Needed for unicode python tests
+    export LC_ALL="en_US.UTF-8"
+    cd tests  # to find the 'support' module
+  '';
+
+  checkInputs = [ pytest pkgs.glibcLocales ];
+
+  checkPhase = ''
+    pytest -k 'not test_dataio_nexml_reader_tree_list and not test_pscores_with'
+  '';
+
+  meta = {
+    homepage = https://dendropy.org/;
+    description = "A Python library for phylogenetic computing";
+    maintainers = with lib.maintainers; [ unode ];
+    license = lib.licenses.bsd3;
+  };
+}