Merge commit '1c40ee6fc44f7eb474c69ea070a43247a1a2c83c'

1 files changed, 27 insertions, 0 deletions

diff --git a/nixpkgs/pkgs/applications/science/biology/spades/default.nix b/nixpkgs/pkgs/applications/science/biology/spades/default.nix
new file mode 100644
index 00000000000..a195f79010a
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/spades/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchurl, zlib, bzip2, cmake }:
+
+stdenv.mkDerivation rec {
+  pname = "SPAdes";
+  version = "3.13.1";
+
+  src = fetchurl {
+    url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz";
+    sha256 = "0giayz197lmq2108filkn9izma3i803sb3iskv9hs5snzdr9p8ld";
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  buildInputs = [ zlib bzip2 ];
+
+  doCheck = true;
+
+  sourceRoot = "${pname}-${version}/src";
+
+  meta = with stdenv.lib; {
+    description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
+    license = licenses.gpl2;
+    homepage = "http://cab.spbu.ru/software/spades/";
+    platforms = platforms.unix;
+    maintainers = [ maintainers.bzizou ];
+  };
+}