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author | Katharina Fey <kookie@spacekookie.de> | 2020-05-20 01:39:43 +0200 |
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committer | Katharina Fey <kookie@spacekookie.de> | 2020-05-20 01:39:43 +0200 |
commit | 1849de11ec1e32e9eebb83f24d5339bea88b7ed7 (patch) | |
tree | 0aaf3cead09c2d55c67c6f6a86ad20af399797d8 /nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix | |
parent | 304c06d7a7ea3f5c84031d325ece8d38b8c1d829 (diff) | |
parent | 0f5ce2fac0c726036ca69a5524c59a49e2973dd4 (diff) |
Merge commit '0f5ce2fac0c726036ca69a5524c59a49e2973dd4'
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix')
-rw-r--r-- | nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix | 15 |
1 files changed, 10 insertions, 5 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix b/nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix index 13f00c53fe6..0a31ff6ba4f 100644 --- a/nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix +++ b/nixpkgs/pkgs/applications/science/biology/plink-ng/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, zlib, openblas, darwin}: +{ stdenv, fetchFromGitHub, zlib, blas, lapack, darwin}: stdenv.mkDerivation rec { pname = "plink-ng"; @@ -11,14 +11,20 @@ stdenv.mkDerivation rec { sha256 = "1zhffjbwpd50dxywccbnv1rxy9njwz73l4awc5j7i28rgj3davcq"; }; - buildInputs = [ zlib ] ++ (if stdenv.isDarwin then [ darwin.apple_sdk.frameworks.Accelerate ] else [ openblas ]) ; + buildInputs = [ zlib ] ++ (if stdenv.isDarwin then [ darwin.apple_sdk.frameworks.Accelerate ] else [ blas lapack ]) ; - buildPhase = '' + preBuild = '' sed -i 's|zlib-1.2.8/zlib.h|zlib.h|g' *.c *.h ${if stdenv.cc.isClang then "sed -i 's|g++|clang++|g' Makefile.std" else ""} - make ZLIB=-lz ${if stdenv.isDarwin then "" else "BLASFLAGS=-lopenblas"} -f Makefile.std + + makeFlagsArray+=( + ZLIB=-lz + BLASFLAGS="-lblas -lcblas -llapack" + ); ''; + makefile = "Makefile.std"; + installPhase = '' mkdir -p $out/bin cp plink $out/bin @@ -31,4 +37,3 @@ stdenv.mkDerivation rec { platforms = stdenv.lib.platforms.linux; }; } - |