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-rw-r--r--nixpkgs/pkgs/development/python-modules/cnvkit/default.nix8
1 files changed, 6 insertions, 2 deletions
diff --git a/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix b/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix
index 054e302dfe7..6677ab06334 100644
--- a/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix
+++ b/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix
@@ -6,6 +6,7 @@
, biopython
, numpy
, scipy
+, scikitlearn
, pandas
, matplotlib
, reportlab
@@ -18,17 +19,18 @@
buildPythonPackage rec {
pname = "CNVkit";
- version = "0.9.6";
+ version = "0.9.7";
src = fetchPypi {
inherit pname version;
- sha256 = "1hj8c98s538i0hg5mrz4bw4v07qmcl51rhxq611rj2nglnc9r25y";
+ sha256 = "d68adc0121e17c61a3aa28c0a9ba6526510a5a0df0f0a6eb1818bab71b7e927a";
};
propagatedBuildInputs = [
biopython
numpy
scipy
+ scikitlearn
pandas
matplotlib
reportlab
@@ -44,6 +46,8 @@ buildPythonPackage rec {
--replace "pandas >= 0.20.1, < 0.25.0" "pandas"
'';
+ pythonImportsCheck = [ "cnvlib" ];
+
meta = with lib; {
homepage = "https://cnvkit.readthedocs.io";
description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data";