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{ lib
, buildPythonPackage
, fetchPypi
, pythonOlder
, cython
, numpy
, scipy
, scikitlearn
, persim
, pytest
}:
buildPythonPackage rec {
pname = "ripser";
version = "0.6.0";
disabled = pythonOlder "3.6";
src = fetchPypi {
inherit pname version;
sha256 = "5c47deffbf9e163186b0997f2d59486d96a7c65766e76500f754fadfbc89f5d9";
};
checkInputs = [
pytest
];
propagatedBuildInputs = [
cython
numpy
scipy
scikitlearn
persim
];
checkPhase = ''
# specifically needed for darwin
export HOME=$(mktemp -d)
mkdir -p $HOME/.matplotlib
echo "backend: ps" > $HOME/.matplotlib/matplotlibrc
pytest
'';
meta = with lib; {
description = "A Lean Persistent Homology Library for Python";
homepage = "https://ripser.scikit-tda.org";
license = licenses.mit;
maintainers = [ maintainers.costrouc ];
};
}
|
