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{ stdenv, buildDunePackage, fetchFromGitHub, fetchpatch
, ounit, async, base64, camlzip, cfstream
, core, ppx_jane, ppx_sexp_conv, rresult, uri, xmlm }:
buildDunePackage rec {
pname = "biocaml";
version = "0.10.1";
owner = "biocaml";
minimumOCamlVersion = "4.07";
src = fetchFromGitHub {
inherit owner;
repo = pname;
rev = "v${version}";
sha256 = "1f19nc8ld0iv45jjnsvaah3ddj88s2n9wj8mrz726kzg85cfr8xj";
};
# fix compilation without and disable -unsafe-string, needed for Ocaml 4.10:
patches = [ (fetchpatch {
url = "https://github.com/biocaml/biocaml/commit/597fa7b0d203684e45ffe03f56c74335b6173ffc.patch";
sha256 = "0b8jdg215cv2k4y3ww7vak2ag5v6v9w8b76qjivr5d1qxz47mqxv";
}) ];
buildInputs = [ ppx_jane ppx_sexp_conv ];
checkInputs = [ ounit ];
propagatedBuildInputs = [ async base64 camlzip cfstream core rresult uri xmlm ];
meta = with stdenv.lib; {
description = "Bioinformatics library for Ocaml";
homepage = "http://${pname}.org";
maintainers = [ maintainers.bcdarwin ];
license = licenses.gpl2;
};
}
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