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-rw-r--r--infra/libkookie/nixpkgs/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch21
1 files changed, 21 insertions, 0 deletions
diff --git a/infra/libkookie/nixpkgs/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch b/infra/libkookie/nixpkgs/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
new file mode 100644
index 000000000000..a9e10f02b0bb
--- /dev/null
+++ b/infra/libkookie/nixpkgs/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
@@ -0,0 +1,21 @@
+diff --git a/rpy2/rinterface_lib/embedded.py b/rpy2/rinterface_lib/embedded.py
+index 1f4babbf..322363c5 100644
+--- a/rpy2/rinterface_lib/embedded.py
++++ b/rpy2/rinterface_lib/embedded.py
+@@ -118,6 +118,16 @@ def _initr(
+ if openrlib.R_HOME is None:
+ raise ValueError('openrlib.R_HOME cannot be None.')
+ os.environ['R_HOME'] = openrlib.R_HOME
++
++ # path to libraries
++ existing = os.environ.get('R_LIBS_SITE')
++ if existing is not None:
++ prefix = existing + ':'
++ else:
++ prefix = ''
++ additional = '@NIX_R_LIBS_SITE@'
++ os.environ['R_LIBS_SITE'] = prefix + additional
++
+ options_c = [ffi.new('char[]', o.encode('ASCII')) for o in _options]
+ n_options = len(options_c)
+ n_options_c = ffi.cast('int', n_options)