diff options
Diffstat (limited to 'infra/libkookie/nixpkgs/pkgs/development/python-modules/dendropy/default.nix')
-rw-r--r-- | infra/libkookie/nixpkgs/pkgs/development/python-modules/dendropy/default.nix | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/infra/libkookie/nixpkgs/pkgs/development/python-modules/dendropy/default.nix b/infra/libkookie/nixpkgs/pkgs/development/python-modules/dendropy/default.nix new file mode 100644 index 000000000000..05737ecf9a86 --- /dev/null +++ b/infra/libkookie/nixpkgs/pkgs/development/python-modules/dendropy/default.nix @@ -0,0 +1,38 @@ +{ lib +, pkgs +, buildPythonPackage +, fetchFromGitHub +, pytest +}: + +buildPythonPackage rec { + pname = "DendroPy"; + version = "4.4.0"; + + # tests are incorrectly packaged in pypi version + src = fetchFromGitHub { + owner = "jeetsukumaran"; + repo = pname; + rev = "v${version}"; + sha256 = "097hfyv2kaf4x92i4rjx0paw2cncxap48qivv8zxng4z7nhid0x9"; + }; + + preCheck = '' + # Needed for unicode python tests + export LC_ALL="en_US.UTF-8" + cd tests # to find the 'support' module + ''; + + checkInputs = [ pytest pkgs.glibcLocales ]; + + checkPhase = '' + pytest -k 'not test_dataio_nexml_reader_tree_list and not test_pscores_with' + ''; + + meta = { + homepage = "https://dendropy.org/"; + description = "A Python library for phylogenetic computing"; + maintainers = with lib.maintainers; [ unode ]; + license = lib.licenses.bsd3; + }; +} |