diff options
Diffstat (limited to 'infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix')
| -rw-r--r-- | infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix | 206 |
1 files changed, 205 insertions, 1 deletions
diff --git a/infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix b/infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix index 3cd9daee1416..a98b69f50e9f 100644 --- a/infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix +++ b/infra/libkookie/nixpkgs/pkgs/development/compilers/julia/1.0.nix @@ -1,4 +1,19 @@ -import ./shared.nix { +{ stdenv, fetchpatch, fetchurl, fetchzip +# build tools +, gfortran, m4, makeWrapper, patchelf, perl, which, python2 +, cmake +# libjulia dependencies +, libunwind, readline, utf8proc, zlib +# standard library dependencies +, curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2 +# linear algebra +, blas, lapack, arpack +# Darwin frameworks +, CoreServices, ApplicationServices +}: + + +let majorVersion = "1"; minorVersion = "0"; maintenanceVersion = "4"; @@ -6,4 +21,193 @@ import ./shared.nix { libuvVersion = "ed3700c849289ed01fe04273a7bf865340b2bd7e"; libuvSha256 = "137w666zsjw1p0ma3lf94d75hr1q45sgkfmbizkyji2qm57cnxjs"; + + dsfmtVersion = "2.2.3"; + dsfmt = fetchurl { + url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmtVersion}.tar.gz"; + sha256 = "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42"; + }; + + libuv = fetchurl { + url = "https://api.github.com/repos/JuliaLang/libuv/tarball/${libuvVersion}"; + sha256 = libuvSha256; + }; + + rmathVersion = "0.1"; + rmath-julia = fetchurl { + url = "https://api.github.com/repos/JuliaLang/Rmath-julia/tarball/v${rmathVersion}"; + sha256 = "1qyps217175qhid46l8f5i1v8i82slgp23ia63x2hzxwfmx8617p"; + }; + + virtualenvVersion = "15.0.0"; + virtualenv = fetchurl { + url = "mirror://pypi/v/virtualenv/virtualenv-${virtualenvVersion}.tar.gz"; + sha256 = "06fw4liazpx5vf3am45q2pdiwrv0id7ckv7n6zmpml29x6vkzmkh"; + }; + + libwhichVersion = "81e9723c0273d78493dc8c8ed570f68d9ce7e89e"; + libwhich = fetchurl { + url = "https://api.github.com/repos/vtjnash/libwhich/tarball/${libwhichVersion}"; + sha256 = "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b"; + }; + + llvmVersion = "6.0.0"; + llvm = fetchurl { + url = "http://releases.llvm.org/6.0.0/llvm-${llvmVersion}.src.tar.xz"; + sha256 = "0224xvfg6h40y5lrbnb9qaq3grmdc5rg00xq03s1wxjfbf8krx8z"; + }; + + suitesparseVersion = "4.4.5"; + suitesparse = fetchurl { + url = "http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-${suitesparseVersion}.tar.gz"; + sha256 = "1jcbxb8jx5wlcixzf6n5dca2rcfx6mlcms1k2rl5gp67ay3bix43"; + }; + version = "${majorVersion}.${minorVersion}.${maintenanceVersion}"; +in + +stdenv.mkDerivation rec { + pname = "julia"; + inherit version; + + src = fetchzip { + url = "https://github.com/JuliaLang/${pname}/releases/download/v${version}/${pname}-${version}.tar.gz"; + sha256 = src_sha256; + }; + + nativeBuildInputs = [ cmake curl gfortran m4 makeWrapper patchelf perl python2 which ]; + # cmake is only used to build the bundled deps + dontUseCmakeConfigure = true; + + # We assert that compatible blas and lapack are used. + buildInputs = assert (blas.isILP64 == lapack.isILP64); [ + arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr + pcre2.dev blas lapack openlibm openspecfun readline utf8proc + zlib + ] + ++ stdenv.lib.optionals stdenv.isDarwin [CoreServices ApplicationServices] + ; + + patches = [ + # Julia recompiles a precompiled file if the mtime stored *in* the + # .ji file differs from the mtime of the .ji file. This + # doesn't work in Nix because Nix changes the mtime of files in + # the Nix store to 1. So patch Julia to accept mtimes of 1. + ./allow_nix_mtime.patch + ./diagonal-test.patch + ./use-system-utf8proc-julia-1.0.patch + ]; + + postPatch = '' + patchShebangs . contrib + for i in backtrace cmdlineargs; do + mv test/$i.jl{,.off} + touch test/$i.jl + done + rm stdlib/Sockets/test/runtests.jl && touch stdlib/Sockets/test/runtests.jl + rm stdlib/Distributed/test/runtests.jl && touch stdlib/Distributed/test/runtests.jl + sed -e 's/Invalid Content-Type:/invalid Content-Type:/g' -i ./stdlib/LibGit2/test/libgit2.jl + sed -e 's/Failed to resolve /failed to resolve /g' -i ./stdlib/LibGit2/test/libgit2.jl + ''; + prePatch = '' + mkdir deps/srccache + cp "${dsfmt}" "./deps/srccache/dsfmt-${dsfmtVersion}.tar.gz" + cp "${rmath-julia}" "./deps/srccache/Rmath-julia-${rmathVersion}.tar.gz" + cp "${libuv}" "./deps/srccache/libuv-${libuvVersion}.tar.gz" + cp "${virtualenv}" "./deps/srccache/virtualenv-${virtualenvVersion}.tar.gz" + cp "${libwhich}" "./deps/srccache/libwhich-${libwhichVersion}.tar.gz" + cp "${llvm}" "./deps/srccache/llvm-${llvmVersion}.src.tar.xz" + cp "${suitesparse}" "./deps/srccache/SuiteSparse-${suitesparseVersion}.tar.gz" + ''; + + makeFlags = + let + arch = stdenv.lib.head (stdenv.lib.splitString "-" stdenv.system); + march = { + x86_64 = stdenv.hostPlatform.platform.gcc.arch or "x86-64"; + i686 = "pentium4"; + aarch64 = "armv8-a"; + }.${arch} + or (throw "unsupported architecture: ${arch}"); + # Julia requires Pentium 4 (SSE2) or better + cpuTarget = { x86_64 = "x86-64"; i686 = "pentium4"; aarch64 = "generic"; }.${arch} + or (throw "unsupported architecture: ${arch}"); + in [ + "ARCH=${arch}" + "MARCH=${march}" + "JULIA_CPU_TARGET=${cpuTarget}" + "PREFIX=$(out)" + "prefix=$(out)" + "SHELL=${stdenv.shell}" + + "USE_SYSTEM_BLAS=1" + "USE_BLAS64=${if blas.isILP64 then "1" else "0"}" + + "USE_SYSTEM_LAPACK=1" + + "USE_SYSTEM_ARPACK=1" + "USE_SYSTEM_FFTW=1" + "USE_SYSTEM_GMP=1" + "USE_SYSTEM_LIBGIT2=1" + "USE_SYSTEM_LIBUNWIND=1" + + # We will probably never do that + #"USE_SYSTEM_LLVM=1" + "LLVM_VER=6.0.0" + + "USE_SYSTEM_MPFR=1" + "USE_SYSTEM_OPENLIBM=1" + "USE_SYSTEM_OPENSPECFUN=1" + "USE_SYSTEM_PATCHELF=1" + "USE_SYSTEM_PCRE=1" + "PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config" + "PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h" + "USE_SYSTEM_READLINE=1" + "USE_SYSTEM_UTF8PROC=1" + "USE_SYSTEM_ZLIB=1" + ]; + + LD_LIBRARY_PATH = assert (blas.isILP64 == lapack.isILP64); (stdenv.lib.makeLibraryPath [ + arpack fftw fftwSinglePrec gmp libgit2 mpfr blas lapack openlibm + openspecfun pcre2 + ]); + + enableParallelBuilding = true; + + doCheck = !stdenv.isDarwin; + checkTarget = "testall"; + # Julia's tests require read/write access to $HOME + preCheck = '' + export HOME="$NIX_BUILD_TOP" + ''; + + preBuild = '' + sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile + sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile + export LD_LIBRARY_PATH=${LD_LIBRARY_PATH} + ''; + + postInstall = '' + # Symlink shared libraries from LD_LIBRARY_PATH into lib/julia, + # as using a wrapper with LD_LIBRARY_PATH causes segmentation + # faults when program returns an error: + # $ julia -e 'throw(Error())' + find $(echo $LD_LIBRARY_PATH | sed 's|:| |g') -maxdepth 1 -name '*.${if stdenv.isDarwin then "dylib" else "so"}*' | while read lib; do + if [[ ! -e $out/lib/julia/$(basename $lib) ]]; then + ln -sv $lib $out/lib/julia/$(basename $lib) + fi + done + ''; + + passthru = { + inherit majorVersion minorVersion maintenanceVersion; + site = "share/julia/site/v${majorVersion}.${minorVersion}"; + }; + + meta = { + description = "High-level performance-oriented dynamical language for technical computing"; + homepage = "https://julialang.org/"; + license = stdenv.lib.licenses.mit; + maintainers = with stdenv.lib.maintainers; [ raskin rob garrison ]; + platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" "aarch64-linux" ]; + }; } |